PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan009678
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 180aa    MW: 20111.8 Da    PI: 9.3421
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55192107PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-19454155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
               ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAaka+++a+  + g
  Aan009678  4 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAAKAYDEAAILMSG 54
               59*******9.**********8.....334*********************987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.54E-34462No hitNo description
PROSITE profilePS5103221.733562IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.7E-33563IPR001471AP2/ERF domain
SMARTSM003804.0E-40568IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-20563IPR016177DNA-binding domain
PfamPF008472.5E-12552IPR001471AP2/ERF domain
PRINTSPR003671.7E-10617IPR001471AP2/ERF domain
PRINTSPR003671.7E-102844IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MGQKKFRGVR QRHWGSWVSE IRHPLLKRRV WLGTFETAEE AAKAYDEAAI LMSGRNAKTN  60
FPLNKPESET SPPTSTTATT KTSALSTMLS AKLRKCCKSP SPSLTCLRLD TESSHIGVWQ  120
KRAGIHSDSN WVMTVELGKN KANNEKIEGV TAFEGDCSRR SSDEEDKIAL QMIEELLNTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-17463464ATERF1
2gcc_A2e-17463464ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925213.11e-85PREDICTED: ethylene-responsive transcription factor WIN1-like
SwissprotQ9XI332e-78WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLS8CLD52e-85S8CLD5_9LAMI; Uncharacterized protein
STRINGGRMZM2G085678_P012e-80(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.18e-66ERF family protein